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Literature Based Discovery [LBD]

March 28, 2019 by Jose Rossello

Literature-Based Discovery (LBD) is a research methodology that seeks to generate new insights or hypotheses by uncovering hidden connections within the scientific literature. It involves analyzing and synthesizing information from various publications to identify potential relationships that have not been explicitly stated in the literature. LBD is particularly useful in fields where there is a vast amount of existing research, such as biomedicine, pharmacology, and environmental science.

Key aspects of Literature-Based Discovery include:

  1. Data Mining and Text Analysis: LBD often involves sophisticated text mining and natural language processing techniques to extract information from scientific articles, such as relationships between biological entities (like genes, diseases, and drugs).
  2. Discovery of Implicit Links: The core idea of LBD is to find implicit, non-obvious connections. For example, one study might link a compound to a particular biological pathway, while another links that pathway to a disease. LBD can connect these dots to hypothesize that the compound might influence the disease.
  3. Generation of Hypotheses: LBD is primarily used for hypothesis generation rather than hypothesis testing. It provides starting points for further experimental or clinical research.
  4. Interdisciplinary Integration: LBD often brings together knowledge from diverse disciplines, potentially leading to breakthroughs that might not be achieved within the silos of individual fields.
  5. Automation with AI and Machine Learning: Advanced computational methods, including AI and machine learning, are increasingly used to automate the LBD process, handling vast amounts of data more efficiently than manual methods.
  6. Application in Drug Discovery and Repurposing: In pharmacology, LBD can identify new potential drug targets, suggest new uses for existing drugs (drug repurposing), and predict adverse drug reactions.
  7. Challenges: Key challenges in LBD include managing the volume and variability of literature data, ensuring the accuracy of extracted information, and dealing with the potential for generating a large number of spurious connections.
  8. Importance in Rapidly Evolving Fields: In areas where research is rapidly evolving, such as in the case of emerging diseases, LBD can quickly synthesize new findings to aid in understanding and response efforts.

Literature-Based Discovery represents a powerful approach in modern research, leveraging the cumulative knowledge in scientific literature to spur innovation and discovery. It exemplifies how the intelligent analysis of existing information can lead to new frontiers in understanding and solving complex problems.

Related Terms:
  • Term: Data Mining

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